Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc1bQ920F6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Smc1bQ920F6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc1bQ920F6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc1bQ920F6 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.98■□□□□ 0.63
Smc1bQ920F6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc1bQ920F6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.98■□□□□ 0.63
Smc1bQ920F6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Smc1bQ920F6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smc1bQ920F6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Smc1bQ920F6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc1bQ920F6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc1bQ920F6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc1bQ920F6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc1bQ920F6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.97■□□□□ 0.63
Smc1bQ920F6 Idnk-204ENSMUST00000226010 1898 ntBASIC18.97■□□□□ 0.63
Smc1bQ920F6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Smc1bQ920F6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smc1bQ920F6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc1bQ920F6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Smc1bQ920F6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.97■□□□□ 0.63
Smc1bQ920F6 Gm27525-201ENSMUST00000184465 107 ntBASIC18.97■□□□□ 0.63
Smc1bQ920F6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc1bQ920F6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.97■□□□□ 0.63
Smc1bQ920F6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Smc1bQ920F6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smc1bQ920F6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc1bQ920F6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc1bQ920F6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Smc1bQ920F6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.96■□□□□ 0.63
Smc1bQ920F6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Smc1bQ920F6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc1bQ920F6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smc1bQ920F6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smc1bQ920F6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smc1bQ920F6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc1bQ920F6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc1bQ920F6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc1bQ920F6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Smc1bQ920F6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc1bQ920F6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc1bQ920F6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc1bQ920F6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc1bQ920F6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc1bQ920F6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc1bQ920F6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc1bQ920F6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc1bQ920F6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Smc1bQ920F6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc1bQ920F6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc1bQ920F6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smc1bQ920F6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.94■□□□□ 0.62
Smc1bQ920F6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc1bQ920F6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smc1bQ920F6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.94■□□□□ 0.62
Smc1bQ920F6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.94■□□□□ 0.62
Smc1bQ920F6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.94■□□□□ 0.62
Smc1bQ920F6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc1bQ920F6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc1bQ920F6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc1bQ920F6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc1bQ920F6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc1bQ920F6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Smc1bQ920F6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smc1bQ920F6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc1bQ920F6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc1bQ920F6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc1bQ920F6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc1bQ920F6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smc1bQ920F6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc1bQ920F6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc1bQ920F6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.93■□□□□ 0.62
Smc1bQ920F6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc1bQ920F6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Smc1bQ920F6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.93■□□□□ 0.62
Smc1bQ920F6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.93■□□□□ 0.62
Smc1bQ920F6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smc1bQ920F6 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms