Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdhga3Q91XY5 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhga3Q91XY5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhga3Q91XY5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhga3Q91XY5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhga3Q91XY5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Pcdhga3Q91XY5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhga3Q91XY5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdhga3Q91XY5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Pcdhga3Q91XY5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhga3Q91XY5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhga3Q91XY5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhga3Q91XY5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdhga3Q91XY5 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhga3Q91XY5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhga3Q91XY5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Pcdhga3Q91XY5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhga3Q91XY5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.7□□□□□ -0.06
Pcdhga3Q91XY5 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhga3Q91XY5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdhga3Q91XY5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Gm27000-201ENSMUST00000182943 842 ntBASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga3Q91XY5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga3Q91XY5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms