Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.54■□□□□ 0.08
Pcdhgb2Q91XX7 Gm9731-201ENSMUST00000209480 747 ntBASIC15.54■□□□□ 0.08
Pcdhgb2Q91XX7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgb2Q91XX7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgb2Q91XX7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgb2Q91XX7 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgb2Q91XX7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgb2Q91XX7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhgb2Q91XX7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhgb2Q91XX7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgb2Q91XX7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgb2Q91XX7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhgb2Q91XX7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhgb2Q91XX7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.53■□□□□ 0.08
Pcdhgb2Q91XX7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgb2Q91XX7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgb2Q91XX7 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.52■□□□□ 0.08
Pcdhgb2Q91XX7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgb2Q91XX7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.52■□□□□ 0.08
Pcdhgb2Q91XX7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgb2Q91XX7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgb2Q91XX7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhgb2Q91XX7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgb2Q91XX7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhgb2Q91XX7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhgb2Q91XX7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhgb2Q91XX7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhgb2Q91XX7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhgb2Q91XX7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.52■□□□□ 0.08
Pcdhgb2Q91XX7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.52■□□□□ 0.07
Pcdhgb2Q91XX7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhgb2Q91XX7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhgb2Q91XX7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Pcdhgb2Q91XX7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Pcdhgb2Q91XX7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhgb2Q91XX7 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhgb2Q91XX7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhgb2Q91XX7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhgb2Q91XX7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhgb2Q91XX7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhgb2Q91XX7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb2Q91XX7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.5■□□□□ 0.07
Pcdhgb2Q91XX7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb2Q91XX7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb2Q91XX7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb2Q91XX7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb2Q91XX7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb2Q91XX7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb2Q91XX7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdhgb2Q91XX7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb2Q91XX7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb2Q91XX7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhgb2Q91XX7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhgb2Q91XX7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms