Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Gm18284-201ENSMUST00000172604 624 ntBASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup35Q8R4R6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup35Q8R4R6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nup35Q8R4R6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms