Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Uba3Q8C878 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Uba3Q8C878 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Uba3Q8C878 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
Uba3Q8C878 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Uba3Q8C878 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Uba3Q8C878 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Uba3Q8C878 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Uba3Q8C878 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Uba3Q8C878 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Uba3Q8C878 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Uba3Q8C878 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Uba3Q8C878 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Uba3Q8C878 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.39■□□□□ 0.37
Uba3Q8C878 Gm29707-201ENSMUST00000196325 491 ntBASIC17.39■□□□□ 0.37
Uba3Q8C878 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.39■□□□□ 0.37
Uba3Q8C878 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Uba3Q8C878 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Uba3Q8C878 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Uba3Q8C878 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uba3Q8C878 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uba3Q8C878 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Uba3Q8C878 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Uba3Q8C878 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uba3Q8C878 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Uba3Q8C878 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uba3Q8C878 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Uba3Q8C878 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Uba3Q8C878 Gm13216-201ENSMUST00000117145 591 ntBASIC17.38■□□□□ 0.37
Uba3Q8C878 Gm25016-201ENSMUST00000158399 131 ntBASIC17.38■□□□□ 0.37
Uba3Q8C878 Gm6623-201ENSMUST00000173570 544 ntBASIC17.38■□□□□ 0.37
Uba3Q8C878 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Uba3Q8C878 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uba3Q8C878 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Uba3Q8C878 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Uba3Q8C878 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uba3Q8C878 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uba3Q8C878 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uba3Q8C878 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uba3Q8C878 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Uba3Q8C878 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uba3Q8C878 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uba3Q8C878 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Uba3Q8C878 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uba3Q8C878 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Uba3Q8C878 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.37■□□□□ 0.37
Uba3Q8C878 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Uba3Q8C878 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Uba3Q8C878 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.37■□□□□ 0.37
Uba3Q8C878 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.37■□□□□ 0.37
Uba3Q8C878 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Uba3Q8C878 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Uba3Q8C878 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Uba3Q8C878 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.36■□□□□ 0.37
Uba3Q8C878 Gm29518-201ENSMUST00000190858 372 ntBASIC17.36■□□□□ 0.37
Uba3Q8C878 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Uba3Q8C878 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Uba3Q8C878 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.36■□□□□ 0.37
Uba3Q8C878 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Uba3Q8C878 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uba3Q8C878 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Uba3Q8C878 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.35■□□□□ 0.37
Uba3Q8C878 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Uba3Q8C878 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Uba3Q8C878 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms