Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Chmp2bQ8BJF9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2bQ8BJF9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2bQ8BJF9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2bQ8BJF9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2bQ8BJF9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Chmp2bQ8BJF9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2bQ8BJF9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2bQ8BJF9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.92■□□□□ 0.3
Chmp2bQ8BJF9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2bQ8BJF9 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.92■□□□□ 0.3
Chmp2bQ8BJF9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.92■□□□□ 0.3
Chmp2bQ8BJF9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2bQ8BJF9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2bQ8BJF9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2bQ8BJF9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2bQ8BJF9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2bQ8BJF9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.92■□□□□ 0.3
Chmp2bQ8BJF9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Gm10653-202ENSMUST00000139570 835 ntBASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Chmp2bQ8BJF9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.9■□□□□ 0.3
Chmp2bQ8BJF9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2bQ8BJF9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2bQ8BJF9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2bQ8BJF9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2bQ8BJF9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chmp2bQ8BJF9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.9■□□□□ 0.3
Chmp2bQ8BJF9 Il3ra-202ENSMUST00000223589 738 ntBASIC16.9■□□□□ 0.3
Chmp2bQ8BJF9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chmp2bQ8BJF9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Chmp2bQ8BJF9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2bQ8BJF9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chmp2bQ8BJF9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Chmp2bQ8BJF9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Chmp2bQ8BJF9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Chmp2bQ8BJF9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chmp2bQ8BJF9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Mir1199-201ENSMUST00000117015 119 ntBASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp2bQ8BJF9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp2bQ8BJF9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms