Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh8Q7TSK3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh8Q7TSK3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdh8Q7TSK3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh8Q7TSK3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh8Q7TSK3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh8Q7TSK3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh8Q7TSK3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh8Q7TSK3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh8Q7TSK3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh8Q7TSK3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh8Q7TSK3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Pcdh8Q7TSK3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pcdh8Q7TSK3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Pcdh8Q7TSK3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.28■□□□□ 0.2
Pcdh8Q7TSK3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh8Q7TSK3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdh8Q7TSK3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh8Q7TSK3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh8Q7TSK3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Pcdh8Q7TSK3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh8Q7TSK3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh8Q7TSK3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh8Q7TSK3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdh8Q7TSK3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh8Q7TSK3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdh8Q7TSK3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh8Q7TSK3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh8Q7TSK3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh8Q7TSK3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdh8Q7TSK3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.27■□□□□ 0.2
Pcdh8Q7TSK3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh8Q7TSK3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh8Q7TSK3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh8Q7TSK3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.27■□□□□ 0.2
Pcdh8Q7TSK3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Pcdh8Q7TSK3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh8Q7TSK3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh8Q7TSK3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh8Q7TSK3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh8Q7TSK3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh8Q7TSK3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.27■□□□□ 0.19
Pcdh8Q7TSK3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh8Q7TSK3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.27■□□□□ 0.19
Pcdh8Q7TSK3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh8Q7TSK3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Gm15794-201ENSMUST00000120182 631 ntBASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh8Q7TSK3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh8Q7TSK3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdh8Q7TSK3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdh8Q7TSK3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdh8Q7TSK3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh8Q7TSK3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh8Q7TSK3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh8Q7TSK3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.24■□□□□ 0.19
Pcdh8Q7TSK3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh8Q7TSK3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh8Q7TSK3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh8Q7TSK3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh8Q7TSK3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh8Q7TSK3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.24■□□□□ 0.19
Pcdh8Q7TSK3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdh8Q7TSK3 Gm7461-201ENSMUST00000058918 827 ntBASIC16.24■□□□□ 0.19
Pcdh8Q7TSK3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Pcdh8Q7TSK3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh8Q7TSK3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms