Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3d21Q7TSG5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3d21Q7TSG5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.06■□□□□ 0.48
Sh3d21Q7TSG5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Sh3d21Q7TSG5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Sh3d21Q7TSG5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.06■□□□□ 0.48
Sh3d21Q7TSG5 Gm26039-201ENSMUST00000158152 144 ntBASIC18.06■□□□□ 0.48
Sh3d21Q7TSG5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3d21Q7TSG5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Sh3d21Q7TSG5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3d21Q7TSG5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3d21Q7TSG5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.06■□□□□ 0.48
Sh3d21Q7TSG5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3d21Q7TSG5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.06■□□□□ 0.48
Sh3d21Q7TSG5 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.06■□□□□ 0.48
Sh3d21Q7TSG5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3d21Q7TSG5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3d21Q7TSG5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sh3d21Q7TSG5 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sh3d21Q7TSG5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.05■□□□□ 0.48
Sh3d21Q7TSG5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3d21Q7TSG5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3d21Q7TSG5 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3d21Q7TSG5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.05■□□□□ 0.48
Sh3d21Q7TSG5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sh3d21Q7TSG5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sh3d21Q7TSG5 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3d21Q7TSG5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3d21Q7TSG5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sh3d21Q7TSG5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Gm18115-201ENSMUST00000221209 621 ntBASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3d21Q7TSG5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d21Q7TSG5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.03■□□□□ 0.48
Sh3d21Q7TSG5 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d21Q7TSG5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d21Q7TSG5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sh3d21Q7TSG5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sh3d21Q7TSG5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d21Q7TSG5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d21Q7TSG5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d21Q7TSG5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d21Q7TSG5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d21Q7TSG5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sh3d21Q7TSG5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d21Q7TSG5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d21Q7TSG5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3d21Q7TSG5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3d21Q7TSG5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms