Protein–RNA interactions for Protein: Q62193

Rpa2, Replication protein A 32 kDa subunit, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa2Q62193 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpa2Q62193 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rpa2Q62193 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rpa2Q62193 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpa2Q62193 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpa2Q62193 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rpa2Q62193 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpa2Q62193 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpa2Q62193 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpa2Q62193 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rpa2Q62193 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rpa2Q62193 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpa2Q62193 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpa2Q62193 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpa2Q62193 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rpa2Q62193 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpa2Q62193 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpa2Q62193 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpa2Q62193 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.17■□□□□ 0.02
Rpa2Q62193 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.17■□□□□ 0.02
Rpa2Q62193 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.17■□□□□ 0.02
Rpa2Q62193 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpa2Q62193 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpa2Q62193 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpa2Q62193 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpa2Q62193 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rpa2Q62193 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rpa2Q62193 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpa2Q62193 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpa2Q62193 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rpa2Q62193 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.17■□□□□ 0.02
Rpa2Q62193 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rpa2Q62193 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpa2Q62193 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpa2Q62193 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpa2Q62193 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpa2Q62193 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.16■□□□□ 0.02
Rpa2Q62193 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpa2Q62193 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.16■□□□□ 0.02
Rpa2Q62193 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rpa2Q62193 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpa2Q62193 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpa2Q62193 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpa2Q62193 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpa2Q62193 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpa2Q62193 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpa2Q62193 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpa2Q62193 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa2Q62193 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa2Q62193 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa2Q62193 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.15■□□□□ 0.02
Rpa2Q62193 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa2Q62193 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.15■□□□□ 0.02
Rpa2Q62193 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rpa2Q62193 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa2Q62193 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Rpa2Q62193 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa2Q62193 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.15■□□□□ 0.02
Rpa2Q62193 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa2Q62193 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rpa2Q62193 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa2Q62193 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa2Q62193 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa2Q62193 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa2Q62193 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa2Q62193 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rpa2Q62193 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa2Q62193 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rpa2Q62193 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa2Q62193 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa2Q62193 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa2Q62193 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa2Q62193 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rpa2Q62193 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rpa2Q62193 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa2Q62193 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa2Q62193 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.14■□□□□ 0.01
Rpa2Q62193 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa2Q62193 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.14■□□□□ 0.01
Rpa2Q62193 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa2Q62193 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa2Q62193 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa2Q62193 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.14■□□□□ 0.01
Rpa2Q62193 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rpa2Q62193 Gm11336-201ENSMUST00000118168 334 ntBASIC15.14■□□□□ 0.01
Rpa2Q62193 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa2Q62193 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.14■□□□□ 0.01
Rpa2Q62193 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa2Q62193 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa2Q62193 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa2Q62193 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa2Q62193 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa2Q62193 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.14■□□□□ 0.01
Rpa2Q62193 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa2Q62193 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa2Q62193 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa2Q62193 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa2Q62193 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa2Q62193 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rpa2Q62193 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms