Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Foxc1Q61572 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Foxc1Q61572 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Foxc1Q61572 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC12.13□□□□□ -0.47
Foxc1Q61572 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.13□□□□□ -0.47
Foxc1Q61572 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Foxc1Q61572 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxc1Q61572 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxc1Q61572 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Foxc1Q61572 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.12□□□□□ -0.47
Foxc1Q61572 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.12□□□□□ -0.47
Foxc1Q61572 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxc1Q61572 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxc1Q61572 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxc1Q61572 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Foxc1Q61572 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxc1Q61572 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxc1Q61572 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxc1Q61572 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Foxc1Q61572 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxc1Q61572 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxc1Q61572 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxc1Q61572 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxc1Q61572 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.12□□□□□ -0.47
Foxc1Q61572 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxc1Q61572 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.12□□□□□ -0.47
Foxc1Q61572 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Foxc1Q61572 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxc1Q61572 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.12□□□□□ -0.47
Foxc1Q61572 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxc1Q61572 Dancr-204ENSMUST00000132389 2347 ntBASIC12.12□□□□□ -0.47
Foxc1Q61572 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxc1Q61572 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxc1Q61572 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxc1Q61572 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Foxc1Q61572 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Foxc1Q61572 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.11□□□□□ -0.47
Foxc1Q61572 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.11□□□□□ -0.47
Foxc1Q61572 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Foxc1Q61572 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Foxc1Q61572 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Foxc1Q61572 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Foxc1Q61572 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Foxc1Q61572 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Gm22697-201ENSMUST00000175194 63 ntBASIC12.11□□□□□ -0.47
Foxc1Q61572 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.11□□□□□ -0.47
Foxc1Q61572 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.11□□□□□ -0.47
Foxc1Q61572 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Foxc1Q61572 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxc1Q61572 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Foxc1Q61572 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms