Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Sox17Q61473 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Gm11249-201ENSMUST00000117071 859 ntBASIC15.54■□□□□ 0.08
Sox17Q61473 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.54■□□□□ 0.08
Sox17Q61473 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.54■□□□□ 0.08
Sox17Q61473 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.54■□□□□ 0.08
Sox17Q61473 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox17Q61473 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox17Q61473 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox17Q61473 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox17Q61473 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox17Q61473 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Sox17Q61473 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.53■□□□□ 0.08
Sox17Q61473 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox17Q61473 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox17Q61473 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox17Q61473 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Sox17Q61473 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sox17Q61473 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox17Q61473 Gm18025-201ENSMUST00000221733 862 ntBASIC15.53■□□□□ 0.08
Sox17Q61473 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox17Q61473 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox17Q61473 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Sox17Q61473 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Sox17Q61473 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Sox17Q61473 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Sox17Q61473 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox17Q61473 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox17Q61473 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox17Q61473 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sox17Q61473 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sox17Q61473 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Sox17Q61473 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox17Q61473 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox17Q61473 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox17Q61473 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox17Q61473 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox17Q61473 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox17Q61473 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox17Q61473 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox17Q61473 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.52■□□□□ 0.08
Sox17Q61473 Gm24841-201ENSMUST00000158676 357 ntBASIC15.52■□□□□ 0.08
Sox17Q61473 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.52■□□□□ 0.08
Sox17Q61473 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.52■□□□□ 0.08
Sox17Q61473 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Sox17Q61473 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Sox17Q61473 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Sox17Q61473 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox17Q61473 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Sox17Q61473 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.52■□□□□ 0.07
Sox17Q61473 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox17Q61473 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox17Q61473 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Sox17Q61473 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox17Q61473 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox17Q61473 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.51■□□□□ 0.07
Sox17Q61473 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox17Q61473 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Sox17Q61473 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox17Q61473 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox17Q61473 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox17Q61473 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox17Q61473 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sox17Q61473 Gm12896-201ENSMUST00000118430 226 ntBASIC15.51■□□□□ 0.07
Sox17Q61473 Gm10517-202ENSMUST00000192970 758 ntBASIC15.51■□□□□ 0.07
Sox17Q61473 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Sox17Q61473 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox17Q61473 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox17Q61473 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.51■□□□□ 0.07
Sox17Q61473 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.51■□□□□ 0.07
Sox17Q61473 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Sox17Q61473 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox17Q61473 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.51■□□□□ 0.07
Sox17Q61473 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox17Q61473 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox17Q61473 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.51■□□□□ 0.07
Sox17Q61473 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox17Q61473 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox17Q61473 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox17Q61473 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox17Q61473 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox17Q61473 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox17Q61473 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox17Q61473 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.5■□□□□ 0.07
Sox17Q61473 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms