Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc6a4Q60857 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a4Q60857 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Slc6a4Q60857 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a4Q60857 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Slc6a4Q60857 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a4Q60857 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a4Q60857 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Slc6a4Q60857 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a4Q60857 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a4Q60857 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a4Q60857 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a4Q60857 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a4Q60857 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.86■□□□□ 0.29
Slc6a4Q60857 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc6a4Q60857 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Slc6a4Q60857 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a4Q60857 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a4Q60857 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Slc6a4Q60857 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a4Q60857 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Slc6a4Q60857 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a4Q60857 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a4Q60857 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a4Q60857 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a4Q60857 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a4Q60857 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.85■□□□□ 0.29
Slc6a4Q60857 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a4Q60857 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc6a4Q60857 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc6a4Q60857 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Slc6a4Q60857 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Slc6a4Q60857 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
Slc6a4Q60857 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Slc6a4Q60857 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.83■□□□□ 0.28
Slc6a4Q60857 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.83■□□□□ 0.28
Slc6a4Q60857 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.83■□□□□ 0.28
Slc6a4Q60857 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Slc6a4Q60857 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc6a4Q60857 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms