Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx49Q4FZF3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx49Q4FZF3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Ddx49Q4FZF3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx49Q4FZF3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx49Q4FZF3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx49Q4FZF3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ddx49Q4FZF3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ddx49Q4FZF3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx49Q4FZF3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ddx49Q4FZF3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx49Q4FZF3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx49Q4FZF3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ddx49Q4FZF3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx49Q4FZF3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx49Q4FZF3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.13■□□□□ 0.65
Ddx49Q4FZF3 Gm43575-201ENSMUST00000196420 516 ntBASIC19.13■□□□□ 0.65
Ddx49Q4FZF3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.13■□□□□ 0.65
Ddx49Q4FZF3 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.13■□□□□ 0.65
Ddx49Q4FZF3 Psmb5-202ENSMUST00000227257 622 ntBASIC19.13■□□□□ 0.65
Ddx49Q4FZF3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx49Q4FZF3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx49Q4FZF3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ddx49Q4FZF3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx49Q4FZF3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx49Q4FZF3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Gm6736-201ENSMUST00000166583 948 ntBASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx49Q4FZF3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Gm25990-201ENSMUST00000102440 86 ntBASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Gm13418-201ENSMUST00000119097 944 ntBASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Gm25745-201ENSMUST00000174945 133 ntBASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx49Q4FZF3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms