Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.13□□□□□ -0.47
Hspg2Q05793 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Gm8396-201ENSMUST00000057361 823 ntBASIC12.13□□□□□ -0.47
Hspg2Q05793 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hspg2Q05793 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.12□□□□□ -0.47
Hspg2Q05793 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Hspg2Q05793 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC12.12□□□□□ -0.47
Hspg2Q05793 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Hspg2Q05793 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Hspg2Q05793 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.12□□□□□ -0.47
Hspg2Q05793 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Hspg2Q05793 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hspg2Q05793 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hspg2Q05793 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hspg2Q05793 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.11□□□□□ -0.47
Hspg2Q05793 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hspg2Q05793 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hspg2Q05793 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hspg2Q05793 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hspg2Q05793 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hspg2Q05793 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hspg2Q05793 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hspg2Q05793 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.11□□□□□ -0.47
Hspg2Q05793 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hspg2Q05793 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hspg2Q05793 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hspg2Q05793 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Hspg2Q05793 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.11□□□□□ -0.47
Hspg2Q05793 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.11□□□□□ -0.47
Hspg2Q05793 Gm23547-201ENSMUST00000158210 271 ntBASIC12.11□□□□□ -0.47
Hspg2Q05793 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hspg2Q05793 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.11□□□□□ -0.47
Hspg2Q05793 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Hspg2Q05793 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.1□□□□□ -0.47
Hspg2Q05793 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.1□□□□□ -0.47
Hspg2Q05793 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Hspg2Q05793 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Hspg2Q05793 Gm5682-201ENSMUST00000173402 505 ntBASIC12.1□□□□□ -0.47
Hspg2Q05793 Gm43767-201ENSMUST00000198933 381 ntBASIC12.1□□□□□ -0.47
Hspg2Q05793 Gm44872-201ENSMUST00000207864 420 ntBASIC12.1□□□□□ -0.47
Hspg2Q05793 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.1□□□□□ -0.47
Hspg2Q05793 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Hspg2Q05793 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.1□□□□□ -0.47
Hspg2Q05793 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.1□□□□□ -0.47
Hspg2Q05793 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hspg2Q05793 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.09□□□□□ -0.47
Hspg2Q05793 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Gm44492-201ENSMUST00000197012 141 ntBASIC12.09□□□□□ -0.47
Hspg2Q05793 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hspg2Q05793 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.09□□□□□ -0.47
Hspg2Q05793 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms