Protein–RNA interactions for Protein: P60897

Sem1, 26S proteasome complex subunit SEM1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sem1P60897 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sem1P60897 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sem1P60897 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Sem1P60897 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sem1P60897 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sem1P60897 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sem1P60897 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sem1P60897 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sem1P60897 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sem1P60897 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sem1P60897 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sem1P60897 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sem1P60897 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sem1P60897 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sem1P60897 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sem1P60897 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sem1P60897 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sem1P60897 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sem1P60897 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sem1P60897 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Sem1P60897 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sem1P60897 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.66■□□□□ 0.1
Sem1P60897 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sem1P60897 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sem1P60897 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sem1P60897 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sem1P60897 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sem1P60897 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.66■□□□□ 0.1
Sem1P60897 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.66■□□□□ 0.1
Sem1P60897 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.66■□□□□ 0.1
Sem1P60897 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sem1P60897 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sem1P60897 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.66■□□□□ 0.1
Sem1P60897 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sem1P60897 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sem1P60897 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sem1P60897 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sem1P60897 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sem1P60897 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sem1P60897 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sem1P60897 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sem1P60897 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Sem1P60897 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sem1P60897 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sem1P60897 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Sem1P60897 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Sem1P60897 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.65■□□□□ 0.1
Sem1P60897 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Sem1P60897 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Sem1P60897 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Sem1P60897 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.65■□□□□ 0.1
Sem1P60897 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sem1P60897 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sem1P60897 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Sem1P60897 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Sem1P60897 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sem1P60897 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sem1P60897 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.64■□□□□ 0.09
Sem1P60897 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.64■□□□□ 0.09
Sem1P60897 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
Sem1P60897 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sem1P60897 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sem1P60897 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.64■□□□□ 0.09
Sem1P60897 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sem1P60897 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sem1P60897 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sem1P60897 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sem1P60897 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sem1P60897 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Sem1P60897 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sem1P60897 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sem1P60897 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sem1P60897 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Sem1P60897 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sem1P60897 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sem1P60897 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sem1P60897 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.64■□□□□ 0.09
Sem1P60897 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms