Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sssca1P56873 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sssca1P56873 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sssca1P56873 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.38□□□□□ -0.27
Sssca1P56873 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sssca1P56873 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sssca1P56873 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sssca1P56873 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
Sssca1P56873 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.37□□□□□ -0.27
Sssca1P56873 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sssca1P56873 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.37□□□□□ -0.27
Sssca1P56873 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.37□□□□□ -0.27
Sssca1P56873 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.37□□□□□ -0.27
Sssca1P56873 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.37□□□□□ -0.27
Sssca1P56873 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Sssca1P56873 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sssca1P56873 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sssca1P56873 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sssca1P56873 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.37□□□□□ -0.27
Sssca1P56873 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.36□□□□□ -0.27
Sssca1P56873 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.36□□□□□ -0.27
Sssca1P56873 Gm43183-201ENSMUST00000200632 547 ntBASIC13.36□□□□□ -0.27
Sssca1P56873 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.36□□□□□ -0.27
Sssca1P56873 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Sssca1P56873 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.36□□□□□ -0.27
Sssca1P56873 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sssca1P56873 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sssca1P56873 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Sssca1P56873 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sssca1P56873 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sssca1P56873 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sssca1P56873 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sssca1P56873 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sssca1P56873 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.35□□□□□ -0.27
Sssca1P56873 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sssca1P56873 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sssca1P56873 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sssca1P56873 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Sssca1P56873 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.35□□□□□ -0.27
Sssca1P56873 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sssca1P56873 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sssca1P56873 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sssca1P56873 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.35□□□□□ -0.27
Sssca1P56873 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.35□□□□□ -0.27
Sssca1P56873 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.35□□□□□ -0.27
Sssca1P56873 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sssca1P56873 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Sssca1P56873 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sssca1P56873 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sssca1P56873 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sssca1P56873 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sssca1P56873 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sssca1P56873 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.35□□□□□ -0.27
Sssca1P56873 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sssca1P56873 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sssca1P56873 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.35□□□□□ -0.27
Sssca1P56873 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms