Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh4P39038 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh4P39038 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh4P39038 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh4P39038 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh4P39038 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Cdh4P39038 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh4P39038 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh4P39038 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cdh4P39038 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh4P39038 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh4P39038 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh4P39038 Gm44450-201ENSMUST00000199528 114 ntBASIC15.8■□□□□ 0.12
Cdh4P39038 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Cdh4P39038 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cdh4P39038 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh4P39038 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cdh4P39038 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh4P39038 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.8■□□□□ 0.12
Cdh4P39038 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh4P39038 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh4P39038 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh4P39038 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh4P39038 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Cdh4P39038 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cdh4P39038 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh4P39038 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.79■□□□□ 0.12
Cdh4P39038 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh4P39038 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cdh4P39038 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cdh4P39038 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cdh4P39038 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh4P39038 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.79■□□□□ 0.12
Cdh4P39038 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.79■□□□□ 0.12
Cdh4P39038 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh4P39038 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.79■□□□□ 0.12
Cdh4P39038 Gm6345-202ENSMUST00000180900 204 ntBASIC15.79■□□□□ 0.12
Cdh4P39038 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Cdh4P39038 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh4P39038 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh4P39038 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh4P39038 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.79■□□□□ 0.12
Cdh4P39038 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh4P39038 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cdh4P39038 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cdh4P39038 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cdh4P39038 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh4P39038 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.78■□□□□ 0.12
Cdh4P39038 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh4P39038 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh4P39038 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh4P39038 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh4P39038 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh4P39038 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh4P39038 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh4P39038 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cdh4P39038 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh4P39038 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh4P39038 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh4P39038 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.78■□□□□ 0.12
Cdh4P39038 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh4P39038 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.78■□□□□ 0.12
Cdh4P39038 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh4P39038 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdh4P39038 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.78■□□□□ 0.12
Cdh4P39038 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh4P39038 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh4P39038 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.77■□□□□ 0.12
Cdh4P39038 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh4P39038 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh4P39038 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.77■□□□□ 0.12
Cdh4P39038 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh4P39038 Gm29707-201ENSMUST00000196325 491 ntBASIC15.77■□□□□ 0.12
Cdh4P39038 Gm18421-201ENSMUST00000204122 625 ntBASIC15.77■□□□□ 0.12
Cdh4P39038 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.77■□□□□ 0.12
Cdh4P39038 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh4P39038 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh4P39038 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.77■□□□□ 0.12
Cdh4P39038 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdh4P39038 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.77■□□□□ 0.11
Cdh4P39038 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh4P39038 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh4P39038 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh4P39038 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh4P39038 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh4P39038 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh4P39038 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh4P39038 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh4P39038 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.77■□□□□ 0.11
Cdh4P39038 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdh4P39038 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh4P39038 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh4P39038 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh4P39038 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cdh4P39038 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh4P39038 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh4P39038 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh4P39038 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.76■□□□□ 0.11
Cdh4P39038 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdh4P39038 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms