Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Foxa1P35582 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Foxa1P35582 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Foxa1P35582 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.26■□□□□ 0.03
Foxa1P35582 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Foxa1P35582 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.26■□□□□ 0.03
Foxa1P35582 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa1P35582 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Foxa1P35582 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Foxa1P35582 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Foxa1P35582 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Foxa1P35582 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Foxa1P35582 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Foxa1P35582 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Foxa1P35582 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.25■□□□□ 0.03
Foxa1P35582 Gm9013-201ENSMUST00000132939 882 ntBASIC15.25■□□□□ 0.03
Foxa1P35582 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.25■□□□□ 0.03
Foxa1P35582 Gm5587-201ENSMUST00000206270 674 ntBASIC15.25■□□□□ 0.03
Foxa1P35582 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Foxa1P35582 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Foxa1P35582 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Foxa1P35582 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Foxa1P35582 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Foxa1P35582 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Foxa1P35582 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Foxa1P35582 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.25■□□□□ 0.03
Foxa1P35582 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Foxa1P35582 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Foxa1P35582 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.24■□□□□ 0.03
Foxa1P35582 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Foxa1P35582 Mir770-201ENSMUST00000103252 94 ntBASIC15.24■□□□□ 0.03
Foxa1P35582 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 AA414768-201ENSMUST00000121924 1257 ntBASIC15.24■□□□□ 0.03
Foxa1P35582 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.24■□□□□ 0.03
Foxa1P35582 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.24■□□□□ 0.03
Foxa1P35582 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.24■□□□□ 0.03
Foxa1P35582 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Foxa1P35582 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.24■□□□□ 0.03
Foxa1P35582 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxa1P35582 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxa1P35582 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxa1P35582 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxa1P35582 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Foxa1P35582 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxa1P35582 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxa1P35582 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.23■□□□□ 0.03
Foxa1P35582 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Foxa1P35582 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.23■□□□□ 0.03
Foxa1P35582 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.23■□□□□ 0.03
Foxa1P35582 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Foxa1P35582 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.23■□□□□ 0.03
Foxa1P35582 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.23■□□□□ 0.03
Foxa1P35582 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Foxa1P35582 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxa1P35582 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Foxa1P35582 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Foxa1P35582 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxa1P35582 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxa1P35582 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Foxa1P35582 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxa1P35582 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms