Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gm17661-201ENSMUST00000170317 270 ntBASIC16.6■□□□□ 0.25
RxrbP28704 Gm42545-201ENSMUST00000202755 922 ntBASIC16.6■□□□□ 0.25
RxrbP28704 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.6■□□□□ 0.25
RxrbP28704 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.6■□□□□ 0.25
RxrbP28704 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RxrbP28704 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RxrbP28704 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RxrbP28704 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RxrbP28704 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RxrbP28704 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RxrbP28704 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RxrbP28704 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RxrbP28704 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RxrbP28704 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RxrbP28704 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RxrbP28704 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RxrbP28704 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RxrbP28704 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RxrbP28704 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RxrbP28704 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RxrbP28704 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RxrbP28704 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RxrbP28704 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.59■□□□□ 0.25
RxrbP28704 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RxrbP28704 Gm27275-201ENSMUST00000184318 272 ntBASIC16.59■□□□□ 0.25
RxrbP28704 Gm37292-201ENSMUST00000192062 758 ntBASIC16.59■□□□□ 0.25
RxrbP28704 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RxrbP28704 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RxrbP28704 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RxrbP28704 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RxrbP28704 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RxrbP28704 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RxrbP28704 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
RxrbP28704 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RxrbP28704 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.59■□□□□ 0.25
RxrbP28704 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.59■□□□□ 0.25
RxrbP28704 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RxrbP28704 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RxrbP28704 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RxrbP28704 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RxrbP28704 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RxrbP28704 Gm12382-201ENSMUST00000122005 922 ntBASIC16.58■□□□□ 0.24
RxrbP28704 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.58■□□□□ 0.24
RxrbP28704 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.58■□□□□ 0.24
RxrbP28704 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.58■□□□□ 0.24
RxrbP28704 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RxrbP28704 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RxrbP28704 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RxrbP28704 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
RxrbP28704 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RxrbP28704 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RxrbP28704 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RxrbP28704 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RxrbP28704 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RxrbP28704 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RxrbP28704 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RxrbP28704 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RxrbP28704 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RxrbP28704 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RxrbP28704 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RxrbP28704 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RxrbP28704 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RxrbP28704 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RxrbP28704 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RxrbP28704 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RxrbP28704 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RxrbP28704 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RxrbP28704 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
RxrbP28704 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RxrbP28704 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RxrbP28704 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RxrbP28704 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RxrbP28704 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RxrbP28704 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.57■□□□□ 0.24
RxrbP28704 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RxrbP28704 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RxrbP28704 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RxrbP28704 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RxrbP28704 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.57■□□□□ 0.24
RxrbP28704 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RxrbP28704 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.57■□□□□ 0.24
RxrbP28704 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.57■□□□□ 0.24
RxrbP28704 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.57■□□□□ 0.24
RxrbP28704 Gm27000-201ENSMUST00000182943 842 ntBASIC16.57■□□□□ 0.24
RxrbP28704 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.57■□□□□ 0.24
RxrbP28704 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RxrbP28704 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RxrbP28704 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
RxrbP28704 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RxrbP28704 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.56■□□□□ 0.24
RxrbP28704 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.56■□□□□ 0.24
RxrbP28704 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RxrbP28704 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RxrbP28704 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RxrbP28704 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RxrbP28704 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RxrbP28704 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RxrbP28704 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RxrbP28704 Gm24841-201ENSMUST00000158676 357 ntBASIC16.56■□□□□ 0.24
RxrbP28704 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms