Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Ccl1P10146 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccl1P10146 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccl1P10146 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.86□□□□□ -0.35
Ccl1P10146 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.86□□□□□ -0.35
Ccl1P10146 Gm7514-201ENSMUST00000209475 934 ntBASIC12.86□□□□□ -0.35
Ccl1P10146 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.86□□□□□ -0.35
Ccl1P10146 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccl1P10146 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ccl1P10146 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Ccl1P10146 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccl1P10146 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccl1P10146 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ccl1P10146 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccl1P10146 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ccl1P10146 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccl1P10146 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ccl1P10146 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Ccl1P10146 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Ccl1P10146 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.85□□□□□ -0.35
Ccl1P10146 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccl1P10146 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl1P10146 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl1P10146 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Ccl1P10146 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl1P10146 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ccl1P10146 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl1P10146 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl1P10146 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl1P10146 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl1P10146 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccl1P10146 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl1P10146 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccl1P10146 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl1P10146 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl1P10146 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.84□□□□□ -0.35
Ccl1P10146 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.84□□□□□ -0.35
Ccl1P10146 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccl1P10146 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.84□□□□□ -0.35
Ccl1P10146 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl1P10146 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Ccl1P10146 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl1P10146 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl1P10146 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccl1P10146 Flg-201ENSMUST00000050758 1488 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms