Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P06328 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.09□□□□□ -0.47
P06328 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P06328 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.09□□□□□ -0.47
P06328 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
P06328 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.09□□□□□ -0.47
P06328 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.09□□□□□ -0.47
P06328 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P06328 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
P06328 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
P06328 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
P06328 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P06328 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.09□□□□□ -0.47
P06328 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
P06328 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
P06328 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P06328 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
P06328 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
P06328 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
P06328 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
P06328 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
P06328 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.08□□□□□ -0.48
P06328 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.08□□□□□ -0.48
P06328 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
P06328 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.08□□□□□ -0.48
P06328 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P06328 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Gm13168-201ENSMUST00000121771 632 ntBASIC12.07□□□□□ -0.48
P06328 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.07□□□□□ -0.48
P06328 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
P06328 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.07□□□□□ -0.48
P06328 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.07□□□□□ -0.48
P06328 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
P06328 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.07□□□□□ -0.48
P06328 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.07□□□□□ -0.48
P06328 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.07□□□□□ -0.48
P06328 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms