Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.96□□□□□ -0.33
P01728 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P01728 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01728 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01728 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.96□□□□□ -0.33
P01728 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01728 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01728 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
P01728 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01728 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.96□□□□□ -0.34
P01728 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01728 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
P01728 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01728 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01728 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
P01728 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
P01728 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
P01728 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
P01728 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.95□□□□□ -0.34
P01728 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.95□□□□□ -0.34
P01728 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
P01728 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
P01728 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.95□□□□□ -0.34
P01728 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
P01728 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.95□□□□□ -0.34
P01728 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P01728 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.95□□□□□ -0.34
P01728 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.94□□□□□ -0.34
P01728 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.94□□□□□ -0.34
P01728 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
P01728 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
P01728 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.94□□□□□ -0.34
P01728 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Shroom3-211ENSMUST00000225438 5742 ntBASIC12.94□□□□□ -0.34
P01728 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01728 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01728 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
P01728 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01728 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01728 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01728 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01728 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01728 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P01728 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01728 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01728 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
P01728 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.93□□□□□ -0.34
P01728 Mir5133-201ENSMUST00000174955 77 ntBASIC12.93□□□□□ -0.34
P01728 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P01728 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.93□□□□□ -0.34
P01728 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
P01728 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01728 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01728 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.93□□□□□ -0.34
P01728 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms