Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Best1O88870 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Best1O88870 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Best1O88870 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Best1O88870 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
Best1O88870 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Best1O88870 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Best1O88870 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Best1O88870 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Best1O88870 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.83■□□□□ 0.12
Best1O88870 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Best1O88870 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Best1O88870 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Best1O88870 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Best1O88870 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Best1O88870 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Best1O88870 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Best1O88870 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Best1O88870 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Best1O88870 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Best1O88870 Gm12644-201ENSMUST00000119935 606 ntBASIC15.82■□□□□ 0.12
Best1O88870 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.82■□□□□ 0.12
Best1O88870 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.82■□□□□ 0.12
Best1O88870 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Best1O88870 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Best1O88870 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Best1O88870 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Best1O88870 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Best1O88870 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Best1O88870 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Best1O88870 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.82■□□□□ 0.12
Best1O88870 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Best1O88870 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.81■□□□□ 0.12
Best1O88870 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Best1O88870 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.81■□□□□ 0.12
Best1O88870 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Best1O88870 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.81■□□□□ 0.12
Best1O88870 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.81■□□□□ 0.12
Best1O88870 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.81■□□□□ 0.12
Best1O88870 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Best1O88870 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Best1O88870 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.81■□□□□ 0.12
Best1O88870 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Best1O88870 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Best1O88870 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Best1O88870 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Best1O88870 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Best1O88870 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.8■□□□□ 0.12
Best1O88870 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Best1O88870 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Best1O88870 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Best1O88870 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Best1O88870 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Best1O88870 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Best1O88870 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Best1O88870 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Best1O88870 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.8■□□□□ 0.12
Best1O88870 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.8■□□□□ 0.12
Best1O88870 Gm43347-201ENSMUST00000200226 580 ntBASIC15.8■□□□□ 0.12
Best1O88870 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Best1O88870 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.8■□□□□ 0.12
Best1O88870 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Best1O88870 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Best1O88870 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Best1O88870 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.8■□□□□ 0.12
Best1O88870 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Best1O88870 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Best1O88870 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Best1O88870 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Best1O88870 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Best1O88870 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Best1O88870 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Best1O88870 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Best1O88870 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Best1O88870 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Best1O88870 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Best1O88870 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Best1O88870 Gm13216-201ENSMUST00000117145 591 ntBASIC15.79■□□□□ 0.12
Best1O88870 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Best1O88870 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.79■□□□□ 0.12
Best1O88870 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Best1O88870 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.79■□□□□ 0.12
Best1O88870 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.79■□□□□ 0.12
Best1O88870 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Best1O88870 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Best1O88870 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Best1O88870 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Best1O88870 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Best1O88870 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Best1O88870 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Best1O88870 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Best1O88870 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Best1O88870 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Best1O88870 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Best1O88870 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Best1O88870 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Best1O88870 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Best1O88870 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Best1O88870 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Best1O88870 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms