Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf17O88472 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.3■□□□□ 0.04
Tnfrsf17O88472 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Tnfrsf17O88472 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf17O88472 Gm5745-201ENSMUST00000183748 313 ntBASIC15.3■□□□□ 0.04
Tnfrsf17O88472 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tnfrsf17O88472 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf17O88472 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf17O88472 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf17O88472 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf17O88472 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.3■□□□□ 0.04
Tnfrsf17O88472 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.3■□□□□ 0.04
Tnfrsf17O88472 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf17O88472 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Gm4459-201ENSMUST00000118750 468 ntBASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf17O88472 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Gm20949-201ENSMUST00000206478 952 ntBASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Tnfrsf17O88472 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Gm13616-201ENSMUST00000120600 222 ntBASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Tnfrsf17O88472 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf17O88472 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf17O88472 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf17O88472 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf17O88472 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf17O88472 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf17O88472 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf17O88472 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Tnfrsf17O88472 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf17O88472 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms