Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Slc1a4O35874 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Slc1a4O35874 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.37■□□□□ 0.69
Slc1a4O35874 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a4O35874 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a4O35874 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a4O35874 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a4O35874 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.37■□□□□ 0.69
Slc1a4O35874 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Slc1a4O35874 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a4O35874 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a4O35874 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a4O35874 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Slc1a4O35874 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a4O35874 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a4O35874 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a4O35874 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Slc1a4O35874 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Slc1a4O35874 Gm15794-201ENSMUST00000120182 631 ntBASIC19.36■□□□□ 0.69
Slc1a4O35874 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a4O35874 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a4O35874 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a4O35874 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a4O35874 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Slc1a4O35874 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Slc1a4O35874 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a4O35874 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.36■□□□□ 0.69
Slc1a4O35874 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a4O35874 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a4O35874 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a4O35874 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a4O35874 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a4O35874 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a4O35874 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a4O35874 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc1a4O35874 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc1a4O35874 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc1a4O35874 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc1a4O35874 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc1a4O35874 Gm17807-201ENSMUST00000186869 298 ntBASIC19.35■□□□□ 0.69
Slc1a4O35874 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.35■□□□□ 0.69
Slc1a4O35874 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.35■□□□□ 0.69
Slc1a4O35874 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.35■□□□□ 0.69
Slc1a4O35874 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Slc1a4O35874 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Slc1a4O35874 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc1a4O35874 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Slc1a4O35874 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc1a4O35874 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc1a4O35874 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Slc1a4O35874 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc1a4O35874 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Slc1a4O35874 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc1a4O35874 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Slc1a4O35874 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc1a4O35874 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc1a4O35874 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc1a4O35874 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Slc1a4O35874 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc1a4O35874 Gm9103-201ENSMUST00000119371 405 ntBASIC19.34■□□□□ 0.69
Slc1a4O35874 Olfr129-201ENSMUST00000122318 993 ntBASIC19.34■□□□□ 0.69
Slc1a4O35874 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.34■□□□□ 0.69
Slc1a4O35874 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.34■□□□□ 0.69
Slc1a4O35874 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc1a4O35874 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.34■□□□□ 0.69
Slc1a4O35874 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc1a4O35874 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Slc1a4O35874 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc1a4O35874 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Slc1a4O35874 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc1a4O35874 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Slc1a4O35874 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc1a4O35874 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Slc1a4O35874 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.34■□□□□ 0.69
Slc1a4O35874 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Slc1a4O35874 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
Slc1a4O35874 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Slc1a4O35874 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Slc1a4O35874 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc1a4O35874 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc1a4O35874 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc1a4O35874 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc1a4O35874 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Slc1a4O35874 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc1a4O35874 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc1a4O35874 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.33■□□□□ 0.68
Slc1a4O35874 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.33■□□□□ 0.68
Slc1a4O35874 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc1a4O35874 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.33■□□□□ 0.68
Slc1a4O35874 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc1a4O35874 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc1a4O35874 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc1a4O35874 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc1a4O35874 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc1a4O35874 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc1a4O35874 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc1a4O35874 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Slc1a4O35874 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc1a4O35874 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc1a4O35874 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms