Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Matn3O35701 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Matn3O35701 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.03■□□□□ -0
Matn3O35701 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn3O35701 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Matn3O35701 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn3O35701 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn3O35701 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn3O35701 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn3O35701 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Matn3O35701 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.03■□□□□ -0
Matn3O35701 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn3O35701 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn3O35701 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn3O35701 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Matn3O35701 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.03■□□□□ -0
Matn3O35701 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.03■□□□□ -0
Matn3O35701 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.03■□□□□ -0
Matn3O35701 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.03■□□□□ -0
Matn3O35701 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Matn3O35701 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Matn3O35701 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Matn3O35701 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Matn3O35701 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Matn3O35701 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Matn3O35701 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Matn3O35701 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Matn3O35701 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Matn3O35701 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Matn3O35701 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Matn3O35701 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Matn3O35701 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Matn3O35701 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Matn3O35701 Gm7290-201ENSMUST00000104990 617 ntBASIC15.02■□□□□ -0
Matn3O35701 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Matn3O35701 Gm12918-201ENSMUST00000120234 636 ntBASIC15.02■□□□□ -0
Matn3O35701 Gm15710-201ENSMUST00000121821 636 ntBASIC15.02■□□□□ -0
Matn3O35701 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.02■□□□□ -0
Matn3O35701 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.02■□□□□ -0
Matn3O35701 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.02■□□□□ -0
Matn3O35701 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.02■□□□□ -0
Matn3O35701 Gm5075-201ENSMUST00000196916 622 ntBASIC15.02■□□□□ -0
Matn3O35701 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.02■□□□□ -0
Matn3O35701 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.02■□□□□ -0
Matn3O35701 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.02■□□□□ -0
Matn3O35701 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.02■□□□□ -0
Matn3O35701 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Matn3O35701 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.02■□□□□ -0
Matn3O35701 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.02■□□□□ -0
Matn3O35701 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.02■□□□□ -0
Matn3O35701 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Matn3O35701 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Matn3O35701 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Matn3O35701 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Matn3O35701 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Matn3O35701 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Matn3O35701 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Matn3O35701 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Matn3O35701 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.02□□□□□ -0.01
Matn3O35701 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Matn3O35701 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Matn3O35701 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Matn3O35701 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Matn3O35701 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Matn3O35701 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Matn3O35701 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.01□□□□□ -0.01
Matn3O35701 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Matn3O35701 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Matn3O35701 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Matn3O35701 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Matn3O35701 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Matn3O35701 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Matn3O35701 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Matn3O35701 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Matn3O35701 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.01□□□□□ -0.01
Matn3O35701 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Matn3O35701 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.01□□□□□ -0.01
Matn3O35701 Gm11643-201ENSMUST00000119578 864 ntBASIC15.01□□□□□ -0.01
Matn3O35701 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Matn3O35701 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.01□□□□□ -0.01
Matn3O35701 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Matn3O35701 Gm4968-201ENSMUST00000071458 858 ntBASIC15.01□□□□□ -0.01
Matn3O35701 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Matn3O35701 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Matn3O35701 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Matn3O35701 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Matn3O35701 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Matn3O35701 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Matn3O35701 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Matn3O35701 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Matn3O35701 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Matn3O35701 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Matn3O35701 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms