Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stx1aO35526 Gm7638-201ENSMUST00000121348 967 ntBASIC18.59■□□□□ 0.57
Stx1aO35526 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.59■□□□□ 0.57
Stx1aO35526 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Stx1aO35526 Il3ra-202ENSMUST00000223589 738 ntBASIC18.59■□□□□ 0.57
Stx1aO35526 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stx1aO35526 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Stx1aO35526 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Stx1aO35526 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Stx1aO35526 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Stx1aO35526 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Stx1aO35526 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Stx1aO35526 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Stx1aO35526 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.58■□□□□ 0.57
Stx1aO35526 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Stx1aO35526 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Stx1aO35526 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Stx1aO35526 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Stx1aO35526 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Stx1aO35526 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.58■□□□□ 0.57
Stx1aO35526 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Stx1aO35526 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Stx1aO35526 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Stx1aO35526 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stx1aO35526 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.58■□□□□ 0.56
Stx1aO35526 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.58■□□□□ 0.56
Stx1aO35526 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.58■□□□□ 0.56
Stx1aO35526 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.58■□□□□ 0.56
Stx1aO35526 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.58■□□□□ 0.56
Stx1aO35526 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stx1aO35526 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stx1aO35526 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stx1aO35526 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stx1aO35526 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Stx1aO35526 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Stx1aO35526 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Stx1aO35526 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Stx1aO35526 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.57■□□□□ 0.56
Stx1aO35526 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stx1aO35526 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stx1aO35526 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stx1aO35526 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Stx1aO35526 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.57■□□□□ 0.56
Stx1aO35526 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.57■□□□□ 0.56
Stx1aO35526 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stx1aO35526 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Stx1aO35526 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Stx1aO35526 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stx1aO35526 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Stx1aO35526 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Stx1aO35526 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.57■□□□□ 0.56
Stx1aO35526 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stx1aO35526 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stx1aO35526 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Stx1aO35526 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stx1aO35526 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Stx1aO35526 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stx1aO35526 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.56■□□□□ 0.56
Stx1aO35526 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stx1aO35526 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Stx1aO35526 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stx1aO35526 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Stx1aO35526 Gm12085-201ENSMUST00000119263 940 ntBASIC18.56■□□□□ 0.56
Stx1aO35526 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stx1aO35526 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stx1aO35526 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Stx1aO35526 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Stx1aO35526 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stx1aO35526 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Stx1aO35526 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Stx1aO35526 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stx1aO35526 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stx1aO35526 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stx1aO35526 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stx1aO35526 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stx1aO35526 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stx1aO35526 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Stx1aO35526 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Stx1aO35526 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stx1aO35526 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Stx1aO35526 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stx1aO35526 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stx1aO35526 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Stx1aO35526 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stx1aO35526 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stx1aO35526 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Stx1aO35526 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Stx1aO35526 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stx1aO35526 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stx1aO35526 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Stx1aO35526 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stx1aO35526 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Stx1aO35526 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stx1aO35526 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stx1aO35526 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stx1aO35526 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stx1aO35526 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stx1aO35526 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Stx1aO35526 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Stx1aO35526 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms