Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Efnb3O35393 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Efnb3O35393 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Efnb3O35393 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Efnb3O35393 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Efnb3O35393 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Efnb3O35393 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Efnb3O35393 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Efnb3O35393 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Efnb3O35393 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.08□□□□□ -0.32
Efnb3O35393 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Efnb3O35393 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.08□□□□□ -0.32
Efnb3O35393 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Efnb3O35393 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Efnb3O35393 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Efnb3O35393 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Efnb3O35393 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Efnb3O35393 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Efnb3O35393 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.08□□□□□ -0.32
Efnb3O35393 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Efnb3O35393 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Efnb3O35393 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Efnb3O35393 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Efnb3O35393 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Efnb3O35393 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Efnb3O35393 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Efnb3O35393 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.07□□□□□ -0.32
Efnb3O35393 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Efnb3O35393 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Efnb3O35393 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.07□□□□□ -0.32
Efnb3O35393 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.07□□□□□ -0.32
Efnb3O35393 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.07□□□□□ -0.32
Efnb3O35393 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Efnb3O35393 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.06□□□□□ -0.32
Efnb3O35393 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.06□□□□□ -0.32
Efnb3O35393 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Efnb3O35393 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Efnb3O35393 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.06□□□□□ -0.32
Efnb3O35393 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.06□□□□□ -0.32
Efnb3O35393 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.06□□□□□ -0.32
Efnb3O35393 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Efnb3O35393 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Efnb3O35393 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Efnb3O35393 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Efnb3O35393 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.05□□□□□ -0.32
Efnb3O35393 Gm37856-201ENSMUST00000191634 999 ntBASIC13.05□□□□□ -0.32
Efnb3O35393 Trmt13-210ENSMUST00000198454 880 ntBASIC13.05□□□□□ -0.32
Efnb3O35393 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Efnb3O35393 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms