Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.92□□□□□ -0.34
Tnfsf11O35235 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf11O35235 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Prob1-201ENSMUST00000097619 3021 ntBASIC12.91□□□□□ -0.34
Tnfsf11O35235 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.91□□□□□ -0.34
Tnfsf11O35235 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Gm26571-201ENSMUST00000181399 666 ntBASIC12.91□□□□□ -0.34
Tnfsf11O35235 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf11O35235 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Gm42569-201ENSMUST00000200539 472 ntBASIC12.9□□□□□ -0.34
Tnfsf11O35235 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Mtag2-201ENSMUST00000058665 714 ntBASIC12.9□□□□□ -0.34
Tnfsf11O35235 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.9□□□□□ -0.34
Tnfsf11O35235 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Tnfsf11O35235 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfsf11O35235 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tnfsf11O35235 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Tnfsf11O35235 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms