Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf3O08791 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf3O08791 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf3O08791 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf3O08791 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf3O08791 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.1■□□□□ 0.33
Ebf3O08791 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf3O08791 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.1■□□□□ 0.33
Ebf3O08791 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ebf3O08791 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ebf3O08791 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ebf3O08791 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ebf3O08791 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.09■□□□□ 0.33
Ebf3O08791 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ebf3O08791 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ebf3O08791 Mir8098-201ENSMUST00000184011 137 ntBASIC17.09■□□□□ 0.33
Ebf3O08791 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.09■□□□□ 0.33
Ebf3O08791 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.09■□□□□ 0.33
Ebf3O08791 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.09■□□□□ 0.33
Ebf3O08791 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ebf3O08791 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ebf3O08791 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ebf3O08791 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ebf3O08791 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ebf3O08791 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.09■□□□□ 0.33
Ebf3O08791 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ebf3O08791 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ebf3O08791 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ebf3O08791 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ebf3O08791 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ebf3O08791 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ebf3O08791 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ebf3O08791 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ebf3O08791 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Ebf3O08791 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ebf3O08791 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ebf3O08791 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.08■□□□□ 0.32
Ebf3O08791 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ebf3O08791 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ebf3O08791 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ebf3O08791 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ebf3O08791 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ebf3O08791 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ebf3O08791 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ebf3O08791 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ebf3O08791 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ebf3O08791 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ebf3O08791 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ebf3O08791 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ebf3O08791 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ebf3O08791 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ebf3O08791 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ebf3O08791 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.07■□□□□ 0.32
Ebf3O08791 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.07■□□□□ 0.32
Ebf3O08791 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.07■□□□□ 0.32
Ebf3O08791 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ebf3O08791 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.07■□□□□ 0.32
Ebf3O08791 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ebf3O08791 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ebf3O08791 Gm13884-201ENSMUST00000118103 829 ntBASIC17.07■□□□□ 0.32
Ebf3O08791 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.07■□□□□ 0.32
Ebf3O08791 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ebf3O08791 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ebf3O08791 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ebf3O08791 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ebf3O08791 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ebf3O08791 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ebf3O08791 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ebf3O08791 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ebf3O08791 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ebf3O08791 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.06■□□□□ 0.32
Ebf3O08791 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ebf3O08791 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ebf3O08791 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ebf3O08791 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ebf3O08791 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ebf3O08791 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ebf3O08791 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ebf3O08791 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.06■□□□□ 0.32
Ebf3O08791 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.06■□□□□ 0.32
Ebf3O08791 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.06■□□□□ 0.32
Ebf3O08791 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.06■□□□□ 0.32
Ebf3O08791 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ebf3O08791 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ebf3O08791 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ebf3O08791 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ebf3O08791 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ebf3O08791 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ebf3O08791 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ebf3O08791 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ebf3O08791 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.05■□□□□ 0.32
Ebf3O08791 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ebf3O08791 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms