Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Gm45058-201ENSMUST00000205810 766 ntBASIC16.95■□□□□ 0.3
Atf6F6VAN0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.95■□□□□ 0.3
Atf6F6VAN0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atf6F6VAN0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atf6F6VAN0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Gm18115-201ENSMUST00000221209 621 ntBASIC16.93■□□□□ 0.3
Atf6F6VAN0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.93■□□□□ 0.3
Atf6F6VAN0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atf6F6VAN0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Atf6F6VAN0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf6F6VAN0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf6F6VAN0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf6F6VAN0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Atf6F6VAN0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf6F6VAN0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf6F6VAN0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.92■□□□□ 0.3
Atf6F6VAN0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf6F6VAN0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf6F6VAN0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf6F6VAN0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Atf6F6VAN0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf6F6VAN0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.92■□□□□ 0.3
Atf6F6VAN0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf6F6VAN0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf6F6VAN0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Atf6F6VAN0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atf6F6VAN0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.92■□□□□ 0.3
Atf6F6VAN0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf6F6VAN0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Atf6F6VAN0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Atf6F6VAN0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf6F6VAN0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.91■□□□□ 0.3
Atf6F6VAN0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Atf6F6VAN0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Atf6F6VAN0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atf6F6VAN0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.91■□□□□ 0.3
Atf6F6VAN0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms