Protein–RNA interactions for Protein: E9PVA8

Gcn1, eIF-2-alpha kinase activator GCN1, mousemouse

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcn1E9PVA8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm22065-201ENSMUST00000103753 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm22066-201ENSMUST00000103761 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm24932-201ENSMUST00000103763 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm24115-201ENSMUST00000103799 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm22190-201ENSMUST00000103827 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm22191-201ENSMUST00000103831 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm24721-201ENSMUST00000103849 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm28018-201ENSMUST00000103869 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm26399-201ENSMUST00000103937 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm25349-201ENSMUST00000177728 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm23616-201ENSMUST00000177797 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm25871-201ENSMUST00000177816 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm24752-201ENSMUST00000178240 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm24496-201ENSMUST00000178287 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm25649-201ENSMUST00000178476 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm25548-201ENSMUST00000178681 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm23147-201ENSMUST00000178841 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm26095-201ENSMUST00000179270 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm22171-201ENSMUST00000179283 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm23936-201ENSMUST00000179354 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm22619-201ENSMUST00000179516 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm25255-201ENSMUST00000179579 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm24755-201ENSMUST00000179691 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm26506-201ENSMUST00000179692 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm25086-201ENSMUST00000179931 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm23243-201ENSMUST00000180047 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm24659-201ENSMUST00000180212 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm24169-201ENSMUST00000180244 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm23689-201ENSMUST00000180354 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm27359-201ENSMUST00000184153 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm27785-201ENSMUST00000184268 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm27466-201ENSMUST00000184396 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm27703-201ENSMUST00000184836 110 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Gcn1E9PVA8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gcn1E9PVA8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gcn1E9PVA8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.92□□□□□ -0.18
Gcn1E9PVA8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.92□□□□□ -0.18
Gcn1E9PVA8 Gm10253-201ENSMUST00000194270 940 ntBASIC13.92□□□□□ -0.18
Gcn1E9PVA8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.92□□□□□ -0.18
Gcn1E9PVA8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gcn1E9PVA8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gcn1E9PVA8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gcn1E9PVA8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.92□□□□□ -0.18
Gcn1E9PVA8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.92□□□□□ -0.18
Gcn1E9PVA8 Gm6180-201ENSMUST00000065243 498 ntBASIC13.92□□□□□ -0.18
Gcn1E9PVA8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gcn1E9PVA8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gcn1E9PVA8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gcn1E9PVA8 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.92□□□□□ -0.18
Gcn1E9PVA8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gcn1E9PVA8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gcn1E9PVA8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Gm14719-201ENSMUST00000121891 340 ntBASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Gm27646-201ENSMUST00000183989 110 ntBASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.91□□□□□ -0.18
Gcn1E9PVA8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms