Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm13186-201ENSMUST00000118031 316 ntBASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm10566-201ENSMUST00000086739 996 ntBASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Actl10-202ENSMUST00000226583 1501 ntBASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trbv13-2A0A140T8N6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Phf7-203ENSMUST00000226565 1971 ntBASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Mir1668-201ENSMUST00000184114 107 ntBASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trbv13-2A0A140T8N6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm9987-201ENSMUST00000069768 567 ntBASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms