Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.35■□□□□ 0.53
Lcmt1A0A0U1RNF2 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.35■□□□□ 0.53
Lcmt1A0A0U1RNF2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Lcmt1A0A0U1RNF2 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.35■□□□□ 0.53
Lcmt1A0A0U1RNF2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lcmt1A0A0U1RNF2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Lcmt1A0A0U1RNF2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lcmt1A0A0U1RNF2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lcmt1A0A0U1RNF2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Lcmt1A0A0U1RNF2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lcmt1A0A0U1RNF2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lcmt1A0A0U1RNF2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lcmt1A0A0U1RNF2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Lcmt1A0A0U1RNF2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Lcmt1A0A0U1RNF2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lcmt1A0A0U1RNF2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lcmt1A0A0U1RNF2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lcmt1A0A0U1RNF2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lcmt1A0A0U1RNF2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lcmt1A0A0U1RNF2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lcmt1A0A0U1RNF2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.33■□□□□ 0.53
Lcmt1A0A0U1RNF2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Lcmt1A0A0U1RNF2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lcmt1A0A0U1RNF2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lcmt1A0A0U1RNF2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lcmt1A0A0U1RNF2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lcmt1A0A0U1RNF2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lcmt1A0A0U1RNF2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.33■□□□□ 0.52
Lcmt1A0A0U1RNF2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Lcmt1A0A0U1RNF2 Gm7370-201ENSMUST00000219471 767 ntBASIC18.33■□□□□ 0.52
Lcmt1A0A0U1RNF2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lcmt1A0A0U1RNF2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.33■□□□□ 0.52
Lcmt1A0A0U1RNF2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lcmt1A0A0U1RNF2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lcmt1A0A0U1RNF2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lcmt1A0A0U1RNF2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lcmt1A0A0U1RNF2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 Gm13216-201ENSMUST00000117145 591 ntBASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 Gm45058-201ENSMUST00000205810 766 ntBASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lcmt1A0A0U1RNF2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms