Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gm37292-201ENSMUST00000192062 758 ntBASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Gm24841-201ENSMUST00000158676 357 ntBASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13d-4A0A0G2JFX3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 548.7 ms