Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav9-4A0A0B4J1K2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav9-4A0A0B4J1K2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav9-4A0A0B4J1K2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav9-4A0A0B4J1K2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gm11336-201ENSMUST00000118168 334 ntBASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-4A0A0B4J1K2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gm18115-201ENSMUST00000221209 621 ntBASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-4A0A0B4J1K2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms