Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm42545-201ENSMUST00000202755 922 ntBASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-5A0A075B6B9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm12382-201ENSMUST00000122005 922 ntBASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Mir5133-201ENSMUST00000174955 77 ntBASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav6d-5A0A075B6B9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trav6d-5A0A075B6B9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Trav6d-5A0A075B6B9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6d-5A0A075B6B9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6d-5A0A075B6B9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm11249-201ENSMUST00000117071 859 ntBASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm13158-201ENSMUST00000122007 736 ntBASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm37292-201ENSMUST00000192062 758 ntBASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms