Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav18A0A075B656 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav18A0A075B656 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Trav18A0A075B656 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav18A0A075B656 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav18A0A075B656 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav18A0A075B656 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav18A0A075B656 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav18A0A075B656 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav18A0A075B656 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Trav18A0A075B656 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav18A0A075B656 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.54□□□□□ -0.24
Trav18A0A075B656 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav18A0A075B656 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav18A0A075B656 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav18A0A075B656 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav18A0A075B656 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav18A0A075B656 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav18A0A075B656 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav18A0A075B656 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav18A0A075B656 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav18A0A075B656 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav18A0A075B656 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.53□□□□□ -0.24
Trav18A0A075B656 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav18A0A075B656 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav18A0A075B656 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav18A0A075B656 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav18A0A075B656 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.52□□□□□ -0.24
Trav18A0A075B656 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav18A0A075B656 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav18A0A075B656 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav18A0A075B656 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav18A0A075B656 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav18A0A075B656 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.52□□□□□ -0.25
Trav18A0A075B656 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav18A0A075B656 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav18A0A075B656 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav18A0A075B656 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms