Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7n-4A0A075B620 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7n-4A0A075B620 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7n-4A0A075B620 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav7n-4A0A075B620 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.52□□□□□ -0.4
Trav7n-4A0A075B620 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7n-4A0A075B620 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav7n-4A0A075B620 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7n-4A0A075B620 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav7n-4A0A075B620 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7n-4A0A075B620 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7n-4A0A075B620 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7n-4A0A075B620 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7n-4A0A075B620 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7n-4A0A075B620 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7n-4A0A075B620 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7n-4A0A075B620 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.52□□□□□ -0.4
Trav7n-4A0A075B620 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7n-4A0A075B620 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav7n-4A0A075B620 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7n-4A0A075B620 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7n-4A0A075B620 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms