Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-6A0A075B603 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Gm13158-201ENSMUST00000122007 736 ntBASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-6A0A075B603 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6-6A0A075B603 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Gm6576-201ENSMUST00000169678 883 ntBASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-6A0A075B603 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-6A0A075B603 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms