Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav9-1A0A075B601 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-1A0A075B601 Il3ra-202ENSMUST00000223589 738 ntBASIC12.92□□□□□ -0.34
Trav9-1A0A075B601 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-1A0A075B601 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-1A0A075B601 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-1A0A075B601 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-1A0A075B601 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-1A0A075B601 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-1A0A075B601 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-1A0A075B601 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9-1A0A075B601 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav9-1A0A075B601 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav9-1A0A075B601 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Gm715-201ENSMUST00000117865 831 ntBASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Gm8520-201ENSMUST00000186517 868 ntBASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav9-1A0A075B601 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav9-1A0A075B601 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav9-1A0A075B601 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms