Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC116618.1-201ENST00000634617 774 ntBASIC5.62□□□□□ -1.51
CTDP1Q9Y5B0 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CTDP1Q9Y5B0 AC011477.1-204ENST00000623416 1325 ntBASIC5.62□□□□□ -1.51
CTDP1Q9Y5B0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CTDP1Q9Y5B0 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CTDP1Q9Y5B0 AP001029.2-203ENST00000589795 4910 ntBASIC5.62□□□□□ -1.51
CTDP1Q9Y5B0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.62□□□□□ -1.51
CTDP1Q9Y5B0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AL672167.1-206ENST00000356293 943 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 Y_RNA.6-201ENST00000362350 114 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 U3.4-201ENST00000363352 213 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 RN7SKP106-201ENST00000410832 272 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 MED14P1-201ENST00000430517 648 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC005154.2-201ENST00000438110 379 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AL357520.1-201ENST00000441557 453 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 HMGB1P16-201ENST00000447155 540 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC005912.1-201ENST00000495392 255 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 RPSAP51-201ENST00000497462 645 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 NIFKP7-201ENST00000503365 834 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC147055.4-201ENST00000504399 745 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC079395.1-201ENST00000510981 262 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 RNU6-1004P-201ENST00000516584 111 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC006349.1-201ENST00000555526 235 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AL049839.1-201ENST00000556151 657 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 EIF1P4-201ENST00000572664 335 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC107982.3-201ENST00000584957 985 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC069545.1-201ENST00000605671 358 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC010424.2-201ENST00000607594 443 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC131235.4-201ENST00000609288 620 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC025588.4-201ENST00000615802 908 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC127502.3-201ENST00000636170 1206 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 AC104623.2-202ENST00000623477 4002 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.61□□□□□ -1.51
CTDP1Q9Y5B0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AC008758.3-201ENST00000507003 1829 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 NSRP1P1-201ENST00000444067 1693 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 AL590240.1-201ENST00000334118 313 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 RNU6-532P-201ENST00000384318 107 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 RPS27AP11-201ENST00000402798 447 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 RPL21P67-201ENST00000402896 478 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 U3.32-201ENST00000408116 212 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 RNA5SP80-201ENST00000410475 111 ntBASIC5.6□□□□□ -1.51
CTDP1Q9Y5B0 TCEA1P4-201ENST00000415066 844 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms