Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RNA5SP283-201ENST00000365604 119 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 TRGV6-201ENST00000417928 299 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 NUTF2P7-201ENST00000453086 375 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AC103987.1-201ENST00000473394 348 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AC108729.2-201ENST00000476543 840 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AC010460.1-201ENST00000507087 466 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AC093014.1-201ENST00000548926 724 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 NPM1P47-201ENST00000560843 856 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AGGF1P6-201ENST00000569213 976 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 MIR4286-201ENST00000580651 93 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AC053481.4-201ENST00000583164 216 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AC022146.1-201ENST00000595307 847 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AC083899.3-201ENST00000603413 594 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 SUMO2P14-201ENST00000604488 293 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AC110792.4-201ENST00000609843 298 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 uc_338.9-201ENST00000617424 182 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 ATE1-AS1-202ENST00000636460 506 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AC058791.1-201ENST00000608412 3198 ntBASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.5□□□□□ -1.85
TRAPPC4Q9Y296 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 SNORA3.3-201ENST00000408712 125 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC019070.1-201ENST00000415008 1024 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 OR5AW1P-201ENST00000426334 1006 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AL390879.2-203ENST00000426943 1121 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 NPM1P24-201ENST00000428039 894 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC017083.1-201ENST00000428093 483 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 RPL34P26-201ENST00000445636 354 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 RPL23AP23-201ENST00000452590 471 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC098824.1-201ENST00000453565 980 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 RN7SL132P-201ENST00000478131 296 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 NPM1P17-201ENST00000479221 602 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 RPS4XP15-201ENST00000489210 795 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC108941.1-201ENST00000502853 530 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 RN7SKP21-201ENST00000516503 220 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 PDCL2P2-201ENST00000533651 189 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC011492.1-201ENST00000600023 315 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC010857.1-201ENST00000606398 594 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 MIR1264-201ENST00000616374 69 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC016957.2-201ENST00000616998 848 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC092628.2-201ENST00000622492 339 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 OR6C71P-202ENST00000641886 1107 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 MTCO1P14-201ENST00000441695 1559 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 AC026951.1-201ENST00000559530 2459 ntBASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRAPPC4Q9Y296 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 XIAPP3-201ENST00000312918 795 ntBASIC3.48□□□□□ -1.85
TRAPPC4Q9Y296 RNU6-252P-201ENST00000363232 107 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms