Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AL392112.1-201ENST00000605115 829 ntBASIC3.68□□□□□ -1.82
CTSFQ9UBX1 AC079791.1-201ENST00000605356 973 ntBASIC3.68□□□□□ -1.82
CTSFQ9UBX1 AC012603.1-201ENST00000606424 528 ntBASIC3.68□□□□□ -1.82
CTSFQ9UBX1 AC135803.1-201ENST00000608748 565 ntBASIC3.68□□□□□ -1.82
CTSFQ9UBX1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.68□□□□□ -1.82
CTSFQ9UBX1 AL139089.1-201ENST00000620372 975 ntBASIC3.68□□□□□ -1.82
CTSFQ9UBX1 AC039056.2-201ENST00000622261 511 ntBASIC3.68□□□□□ -1.82
CTSFQ9UBX1 AF001550.2-201ENST00000636643 217 ntBASIC3.68□□□□□ -1.82
CTSFQ9UBX1 OR5AC4P-202ENST00000642086 985 ntBASIC3.68□□□□□ -1.82
CTSFQ9UBX1 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CTSFQ9UBX1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.68□□□□□ -1.82
CTSFQ9UBX1 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CTSFQ9UBX1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CTSFQ9UBX1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 RNA5SP124-201ENST00000362739 110 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 RNA5SP189-201ENST00000364920 115 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 AC083799.1-201ENST00000366451 910 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 RNU4-31P-201ENST00000384211 141 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 AC007389.2-201ENST00000434630 306 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 RSL24D1P2-201ENST00000445584 366 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 RNU7-170P-201ENST00000459303 61 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 RPL7L1P8-201ENST00000469911 741 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 RPL21P129-201ENST00000491732 478 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 RPL7P47-201ENST00000497299 556 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 PCNAP1-201ENST00000505363 709 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 AC005921.1-201ENST00000510589 286 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 RN7SKP141-201ENST00000516167 338 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 SNORA67.7-201ENST00000516664 135 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 ZNF192P1-203ENST00000565888 810 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 MIR3158-1-201ENST00000583596 81 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 AL591424.2-201ENST00000617023 128 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 AC006133.1-201ENST00000617106 264 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 SEPT7P7-201ENST00000420492 1301 ntBASIC3.67□□□□□ -1.82
CTSFQ9UBX1 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTSFQ9UBX1 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 AF127577.6-201ENST00000623352 2191 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 AC000367.1-201ENST00000452711 1766 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 SNORA31-201ENST00000362607 130 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 RNU6-328P-201ENST00000390887 106 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 ATP5F1P3-201ENST00000397213 657 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 HNRNPDP2-201ENST00000406475 478 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 AC009237.5-201ENST00000414271 501 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 AC018644.1-201ENST00000429934 551 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 MTCO1P54-201ENST00000430139 712 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 AL035246.1-201ENST00000433554 1255 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 HMGB1P37-201ENST00000439613 609 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 AL500522.2-201ENST00000448562 343 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 SNRPGP3-201ENST00000469405 227 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 AC078785.3-201ENST00000476607 425 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 HMGB3P14-201ENST00000494195 599 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 AC021087.2-201ENST00000504656 1203 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 RNU6-491P-201ENST00000516099 110 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 SNORA70.17-201ENST00000516449 133 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 SCARNA14-201ENST00000516903 136 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 SOD1P3-201ENST00000518682 454 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 GNRHR2P1-201ENST00000555315 631 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 MIR4429-201ENST00000580105 73 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 Z82195.1-201ENST00000604558 398 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 AP000255.1-201ENST00000610276 676 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 AL392048.1-201ENST00000613946 534 ntBASIC3.66□□□□□ -1.82
CTSFQ9UBX1 AL121772.2-201ENST00000614331 297 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms