Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL391261.4-201ENST00000616012 481 ntBASIC3.37□□□□□ -1.87
VPS29Q9UBQ0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
VPS29Q9UBQ0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS29Q9UBQ0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
VPS29Q9UBQ0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS29Q9UBQ0 AC096656.1-201ENST00000623826 1364 ntBASIC3.37□□□□□ -1.87
VPS29Q9UBQ0 MFSD8-233ENST00000641482 4860 ntBASIC3.37□□□□□ -1.87
VPS29Q9UBQ0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
VPS29Q9UBQ0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 OTUD4P1-201ENST00000237841 3067 ntBASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 SPATA2P1-201ENST00000431223 2055 ntBASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 FRG1CP-201ENST00000358464 769 ntBASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 RNU6-328P-201ENST00000390887 106 ntBASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 AC007967.1-201ENST00000455422 1159 ntBASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 AP000873.1-201ENST00000463987 400 ntBASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 AC068587.1-201ENST00000483613 781 ntBASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 RPL7P47-201ENST00000497299 556 ntBASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 RN7SKP60-201ENST00000516985 239 ntBASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 AC084824.1-201ENST00000550917 1005 ntBASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 AC006116.10-201ENST00000591836 581 ntBASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 AC119501.1-201ENST00000603646 475 ntBASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 AC005972.3-201ENST00000606304 481 ntBASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 AL391834.1-201ENST00000609609 560 ntBASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 AC110801.1-201ENST00000623590 212 ntBASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 AC116563.2-201ENST00000624751 535 ntBASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 AC112200.1-201ENST00000625015 234 ntBASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS29Q9UBQ0 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 RNU6-532P-201ENST00000384318 107 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 MIR184-201ENST00000384962 84 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 SNORA57.1-201ENST00000391227 145 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 RN7SKP159-201ENST00000410657 292 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 RPL17P36-201ENST00000420302 549 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 MTCYBP29-201ENST00000436327 1006 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 RPL12P26-201ENST00000452430 487 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 RNU7-170P-201ENST00000459303 61 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 SNX5P1-201ENST00000505757 1041 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 RN7SKP18-201ENST00000516005 275 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 SNORA70.18-201ENST00000516696 98 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 RNU4-18P-201ENST00000516751 149 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 IGKV2-23-201ENST00000518729 323 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 AC106785.3-201ENST00000564064 847 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 NF1P5-201ENST00000588287 448 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 AC012531.5-201ENST00000611375 151 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 AL592295.2-201ENST00000612578 206 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 AC243654.2-201ENST00000612843 443 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 U7.8-201ENST00000619968 63 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 U4.6-201ENST00000621618 127 ntBASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS29Q9UBQ0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS29Q9UBQ0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VPS29Q9UBQ0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS29Q9UBQ0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS29Q9UBQ0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS29Q9UBQ0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VPS29Q9UBQ0 RNU6-1251P-201ENST00000364502 107 ntBASIC3.34□□□□□ -1.87
VPS29Q9UBQ0 RPL21P17-201ENST00000397467 475 ntBASIC3.34□□□□□ -1.87
VPS29Q9UBQ0 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.34□□□□□ -1.87
VPS29Q9UBQ0 RN7SKP285-201ENST00000410137 318 ntBASIC3.34□□□□□ -1.87
VPS29Q9UBQ0 AC013404.1-201ENST00000413068 249 ntBASIC3.34□□□□□ -1.87
VPS29Q9UBQ0 DBIP2-201ENST00000419076 262 ntBASIC3.34□□□□□ -1.87
VPS29Q9UBQ0 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.34□□□□□ -1.87
VPS29Q9UBQ0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms