Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
HMG20AQ9NP66 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.35□□□□□ -1.87
HMG20AQ9NP66 AL163152.1-201ENST00000642001 374 ntBASIC3.35□□□□□ -1.87
HMG20AQ9NP66 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMG20AQ9NP66 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HMG20AQ9NP66 AC000367.1-201ENST00000452711 1766 ntBASIC3.35□□□□□ -1.87
HMG20AQ9NP66 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.35□□□□□ -1.87
HMG20AQ9NP66 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HMG20AQ9NP66 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 RNA5SP383-201ENST00000362934 120 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 RNU6-883P-201ENST00000384597 107 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 GTF2IP23-201ENST00000423746 351 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 FAR1P1-201ENST00000427163 934 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 MTCO3P21-201ENST00000430791 643 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AL356276.2-201ENST00000435919 558 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 MTND5P8-201ENST00000449817 1083 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 RPS11P1-201ENST00000451072 473 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 SNRPGP3-201ENST00000469405 227 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AC006463.2-201ENST00000473326 348 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AL132838.2-201ENST00000492041 314 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AC010627.1-201ENST00000503819 1294 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 SMARCE1P4-201ENST00000523647 241 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 OR4A12P-201ENST00000530847 918 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AC023575.1-201ENST00000580510 358 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 KPNA2P3-201ENST00000584190 848 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AC005242.1-201ENST00000585658 438 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AL049844.2-201ENST00000604280 628 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AC090525.3-201ENST00000605601 189 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AC025016.1-201ENST00000616746 682 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AP004607.9-201ENST00000618202 316 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AC010435.1-201ENST00000623353 1177 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 HPVC1-201ENST00000629899 1198 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 OR52H1-202ENST00000641796 1061 ntBASIC3.34□□□□□ -1.87
HMG20AQ9NP66 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMG20AQ9NP66 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HMG20AQ9NP66 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
HMG20AQ9NP66 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HMG20AQ9NP66 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 CASC19-261ENST00000641853 1638 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 MIR92A2-201ENST00000385299 75 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AL356057.1-202ENST00000402263 756 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AC093578.1-201ENST00000415219 368 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AC007390.1-201ENST00000415722 356 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 MTND4P24-201ENST00000424002 397 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 BX890604.2-201ENST00000427883 474 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 MTCO1P52-201ENST00000433928 531 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AC092013.1-201ENST00000438795 332 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 RNU7-27P-201ENST00000459281 62 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AP000873.1-201ENST00000463987 400 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AC025181.1-201ENST00000477507 416 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 KCTD9P5-201ENST00000504141 1170 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 RNU6-1004P-201ENST00000516584 111 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 MRPL49P2-201ENST00000521066 465 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AC004923.2-201ENST00000529649 369 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 SNRPGP1-201ENST00000553864 222 ntBASIC3.33□□□□□ -1.88
HMG20AQ9NP66 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms