Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 RPL23AP33-201ENST00000442301 452 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 EXTL2P1-201ENST00000446218 416 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 RPL7L1P8-201ENST00000469911 741 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 HMGB3P14-201ENST00000494195 599 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 AL139099.1-201ENST00000497398 403 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 AC025554.1-201ENST00000505641 188 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 RPL7L1P13-201ENST00000511702 739 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 RN7SKP277-201ENST00000516895 283 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 TRMT10BP1-201ENST00000519377 943 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 AC004923.2-201ENST00000529649 369 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 AC008739.3-201ENST00000603262 127 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 XPOTP1-201ENST00000443317 2398 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 RNA5SP124-201ENST00000362739 110 ntBASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 RNA5SP322-201ENST00000363617 119 ntBASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 RNU2-6P-201ENST00000411404 190 ntBASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 AMD1P2-201ENST00000412936 992 ntBASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 CKS1BP5-201ENST00000434172 273 ntBASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 MTND2P25-201ENST00000449028 610 ntBASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 CEACAMP4-201ENST00000457676 421 ntBASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 OR9M1P-201ENST00000459641 921 ntBASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 CBX3P2-202ENST00000583365 535 ntBASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 AC079791.1-201ENST00000605356 973 ntBASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 AL121772.2-201ENST00000614331 297 ntBASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 AC004777.1-201ENST00000624317 287 ntBASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 NSRP1P1-201ENST00000444067 1693 ntBASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TM9SF3Q9HD45 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AL592494.2-201ENST00000425455 1548 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AL161912.2-201ENST00000565707 3007 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 MIR449B-201ENST00000384995 97 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 MIR1303-201ENST00000408625 86 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AC069157.1-201ENST00000421749 137 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 NOTCH2P1-201ENST00000443481 624 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AC097499.1-201ENST00000444277 208 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 YWHAQP9-201ENST00000445891 512 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 HMGB1P48-201ENST00000446155 598 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 RPL36AP13-201ENST00000457490 317 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 OR9N1P-202ENST00000494289 481 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 RPL29P14-201ENST00000495837 428 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AC078918.1-201ENST00000498515 228 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 MTCO1P31-201ENST00000506355 492 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 KRT19P6-201ENST00000510983 209 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 MIR2114-201ENST00000516645 80 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 RN7SKP283-201ENST00000517197 270 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AC008802.1-201ENST00000519121 791 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AC091515.1-201ENST00000548110 679 ntBASIC4.01□□□□□ -1.77
TM9SF3Q9HD45 AC063950.1-201ENST00000552036 308 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms