Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC011005.3-201ENST00000491624 395 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AC116353.3-201ENST00000511215 249 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AC007016.1-201ENST00000512110 244 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AC090151.1-201ENST00000520784 730 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 C1GALT1P3-201ENST00000522049 819 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AC092470.1-201ENST00000546187 132 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 NBEAP1-201ENST00000554452 979 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AC044860.2-201ENST00000561005 179 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 UBE2FP2-201ENST00000566646 462 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AC138915.2-201ENST00000569776 97 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 SNORD39.3-201ENST00000584451 71 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 NIFKP6-201ENST00000598115 845 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AC009220.3-201ENST00000604318 586 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 RNA5SP108-201ENST00000605921 117 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AL023881.1-201ENST00000621088 301 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AL672167.1-203ENST00000641299 2975 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 NMD3P1-201ENST00000439704 1488 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 MIR323B-201ENST00000385269 82 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 RNA5SP372-201ENST00000390836 115 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AF228730.1-201ENST00000397972 663 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 HSPD1P16-201ENST00000402302 394 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 RNA5SP80-201ENST00000410475 111 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AC005005.2-201ENST00000420779 380 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AC062016.2-201ENST00000420950 676 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 USP9YP11-201ENST00000427537 717 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 RPL23AP25-201ENST00000430973 463 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AL133477.1-201ENST00000457472 514 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 RPS3AP41-201ENST00000462701 778 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 MTND1P16-201ENST00000465177 898 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AC105233.1-201ENST00000498840 781 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AC109445.1-201ENST00000512356 383 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AC023538.1-201ENST00000534576 736 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 MIR3934-201ENST00000579806 107 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 DUXAP3-201ENST00000603616 594 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AP003392.5-201ENST00000607857 415 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AL513477.2-201ENST00000607858 568 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AL159169.3-201ENST00000608871 561 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 OR6R2P-201ENST00000609216 300 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AC073348.1-201ENST00000623002 331 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AL355480.1-201ENST00000629041 99 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AC108467.2-201ENST00000617640 1597 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 AL356489.2-201ENST00000566968 3528 ntBASIC4.39□□□□□ -1.71
BRF2Q9HAW0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
BRF2Q9HAW0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
BRF2Q9HAW0 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms