Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SEC61A2Q9H9S3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SEC61A2Q9H9S3 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
SEC61A2Q9H9S3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SEC61A2Q9H9S3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
SEC61A2Q9H9S3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SEC61A2Q9H9S3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC138915.3-201ENST00000562908 1389 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC006378.2-201ENST00000623178 2476 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 SNRPEP3-201ENST00000338402 276 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 RN7SKP185-201ENST00000362813 326 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 RNA5SP30-201ENST00000365552 115 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 Y_RNA.548-201ENST00000384656 105 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 SNRPEP2-201ENST00000397592 279 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 MIR320C1-201ENST00000408566 88 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 RN7SKP286-201ENST00000410894 299 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AL596448.1-201ENST00000415024 392 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 DYNLL1P7-201ENST00000429273 258 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 MTND4P19-201ENST00000446659 478 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 RPS27AP15-201ENST00000447672 466 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC097493.1-201ENST00000463958 372 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 RN7SL197P-201ENST00000466981 299 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 RN7SL174P-201ENST00000475578 289 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 RN7SL101P-201ENST00000496350 279 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 HMGN1P13-201ENST00000505795 138 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 RNU6-615P-201ENST00000516065 106 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 RNA5SP230-201ENST00000517039 122 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 FTH1P11-201ENST00000517577 551 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AP003467.2-201ENST00000520175 319 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 HIGD1AP6-201ENST00000521833 279 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AP003122.4-201ENST00000530980 758 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC068587.4-201ENST00000533893 186 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AL157394.1-201ENST00000562983 1224 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 SNORD95-201ENST00000579879 68 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AP001180.3-201ENST00000582221 145 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC012507.3-201ENST00000603556 477 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AL391646.1-201ENST00000603860 190 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AP001836.1-201ENST00000604675 523 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AP001521.1-201ENST00000609150 300 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC093788.1-201ENST00000609356 927 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC243773.3-201ENST00000613270 256 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AL732618.1-201ENST00000623251 301 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC026634.1-201ENST00000634369 198 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC119744.1-201ENST00000454746 1715 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 AC008079.2-201ENST00000623543 20396 ntBASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SEC61A2Q9H9S3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.95□□□□□ -1.62
SEC61A2Q9H9S3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SEC61A2Q9H9S3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SEC61A2Q9H9S3 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SEC61A2Q9H9S3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.95□□□□□ -1.62
SEC61A2Q9H9S3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SEC61A2Q9H9S3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.95□□□□□ -1.62
SEC61A2Q9H9S3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SEC61A2Q9H9S3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SEC61A2Q9H9S3 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
SEC61A2Q9H9S3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SEC61A2Q9H9S3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SEC61A2Q9H9S3 OR11H4-201ENST00000315409 1082 ntBASIC4.95□□□□□ -1.62
SEC61A2Q9H9S3 RNU6-115P-201ENST00000364310 107 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms