Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.82□□□□□ -1.8
C9orf72Q96LT7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
C9orf72Q96LT7 AC066616.2-201ENST00000559334 1481 ntBASIC3.81□□□□□ -1.8
C9orf72Q96LT7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
C9orf72Q96LT7 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
C9orf72Q96LT7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
C9orf72Q96LT7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
C9orf72Q96LT7 PTMAP2-201ENST00000397627 327 ntBASIC3.81□□□□□ -1.8
C9orf72Q96LT7 AL590704.1-201ENST00000402856 794 ntBASIC3.81□□□□□ -1.8
C9orf72Q96LT7 AL445584.1-201ENST00000431451 330 ntBASIC3.81□□□□□ -1.8
C9orf72Q96LT7 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.81□□□□□ -1.8
C9orf72Q96LT7 XKRYP6-201ENST00000440468 1116 ntBASIC3.81□□□□□ -1.8
C9orf72Q96LT7 XKRYP3-201ENST00000442113 1116 ntBASIC3.81□□□□□ -1.8
C9orf72Q96LT7 AC018635.1-201ENST00000468292 1030 ntBASIC3.81□□□□□ -1.8
C9orf72Q96LT7 RPS3AP50-201ENST00000487064 803 ntBASIC3.81□□□□□ -1.8
C9orf72Q96LT7 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.81□□□□□ -1.8
C9orf72Q96LT7 AC016550.3-201ENST00000515706 767 ntBASIC3.81□□□□□ -1.8
C9orf72Q96LT7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.81□□□□□ -1.8
C9orf72Q96LT7 OR4C2P-201ENST00000530855 1064 ntBASIC3.81□□□□□ -1.8
C9orf72Q96LT7 CYCSP30-201ENST00000546447 172 ntBASIC3.81□□□□□ -1.8
C9orf72Q96LT7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.81□□□□□ -1.8
C9orf72Q96LT7 MIR548Y-201ENST00000582739 110 ntBASIC3.81□□□□□ -1.8
C9orf72Q96LT7 NF1P5-201ENST00000588287 448 ntBASIC3.81□□□□□ -1.8
C9orf72Q96LT7 AC015726.1-201ENST00000602353 681 ntBASIC3.81□□□□□ -1.8
C9orf72Q96LT7 Z82195.1-201ENST00000604558 398 ntBASIC3.81□□□□□ -1.8
C9orf72Q96LT7 MIR92B-201ENST00000607575 96 ntBASIC3.81□□□□□ -1.8
C9orf72Q96LT7 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
C9orf72Q96LT7 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.81□□□□□ -1.8
C9orf72Q96LT7 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.81□□□□□ -1.8
C9orf72Q96LT7 CEP170P1-201ENST00000502249 4587 ntBASIC3.81□□□□□ -1.8
C9orf72Q96LT7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
C9orf72Q96LT7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.81□□□□□ -1.8
C9orf72Q96LT7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 RNA5SP97-201ENST00000365006 84 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 RNU6-317P-201ENST00000384031 107 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 MIR30B-201ENST00000384850 88 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 AC127526.1-201ENST00000417526 366 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 HMGB3P20-201ENST00000417997 600 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 RPS12P23-201ENST00000419579 400 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 ANP32BP2-201ENST00000454525 545 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 AP002345.1-201ENST00000456493 928 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 NPM1P17-201ENST00000479221 602 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 RN7SL323P-201ENST00000494712 295 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 NIPA2P2-201ENST00000496376 1083 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 HMGB1P47-201ENST00000511281 589 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 AC008011.1-201ENST00000545989 227 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 AC074029.2-201ENST00000551045 634 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 OR4U1P-201ENST00000554958 912 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 AC023158.1-201ENST00000561632 1025 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 AC112230.1-201ENST00000604342 547 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 C2orf27A-204ENST00000623058 969 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 FP236240.3-201ENST00000623061 327 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 OR8B1P-202ENST00000641132 1178 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.8□□□□□ -1.8
C9orf72Q96LT7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
C9orf72Q96LT7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 RNU6-185P-201ENST00000384421 107 ntBASIC3.79□□□□□ -1.8
C9orf72Q96LT7 MIR7-1-201ENST00000384871 110 ntBASIC3.79□□□□□ -1.8
C9orf72Q96LT7 SOD2P1-201ENST00000396543 562 ntBASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AC105402.1-201ENST00000413336 545 ntBASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AL389915.1-201ENST00000422463 466 ntBASIC3.79□□□□□ -1.8
C9orf72Q96LT7 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AC018644.1-201ENST00000429934 551 ntBASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AL035246.1-201ENST00000433554 1255 ntBASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AL353093.1-201ENST00000441292 436 ntBASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 HMGB1P26-201ENST00000452520 628 ntBASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AC091917.2-201ENST00000505002 744 ntBASIC3.79□□□□□ -1.8
C9orf72Q96LT7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms